STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_10372Potassium voltage-gated channel subfamily A member 3; Belongs to the potassium channel family. (483 aa)    
Predicted Functional Partners:
N307_13794
60S ribosomal protein L26.
  
 0.841
N307_04898
60S ribosomal protein L35.
  
 0.841
N307_05229
60S ribosomal protein L35a.
   
 0.840
N307_01697
60S ribosomal protein L24.
  
 0.839
N307_02264
60S ribosomal protein L32.
  
 0.839
N307_07399
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.837
N307_14399
60S ribosomal protein L30.
   
 0.837
N307_09133
60S ribosomal protein L31.
   
 0.834
N307_00197
60S ribosomal protein L5.
  
 0.832
N307_11212
60S acidic ribosomal protein P2.
   
 0.828
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.