STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13779Beta-1,4-galactosyltransferase 7. (308 aa)    
Predicted Functional Partners:
N307_01490
Hexosyltransferase.
    
 0.934
N307_05919
Xylosyltransferase 1.
     
 0.897
N307_07137
Xylosyltransferase 2.
     
 0.897
N307_02320
Heterogeneous nuclear ribonucleoprotein K.
 
      0.755
N307_03510
Poly(RC)-binding protein 4.
 
      0.654
N307_09869
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7.
     
 0.652
N307_10782
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter.
   
  
 0.618
N307_08553
Glypican-5; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.611
N307_14405
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.570
N307_03982
Decorin; May affect the rate of fibrils formation.
     
 0.570
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.