STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06360Fe-S_biosyn domain-containing protein. (102 aa)    
Predicted Functional Partners:
N307_11582
Fe-S_biosyn domain-containing protein.
  
 0.990
N307_00942
NifU_N domain-containing protein.
  
  
 0.940
N307_10729
Aminotran_5 domain-containing protein.
  
 
 0.904
N307_11423
Glutaredoxin-3.
  
 0.887
N307_08571
Selenocysteine lyase.
  
 
 0.883
N307_00222
Nfu_N domain-containing protein.
  
 
 0.875
N307_13622
Glutaredoxin domain-containing protein.
   
 0.793
N307_05469
Molybdenum cofactor sulfurase.
  
 0.770
N307_11068
Uncharacterized protein.
  
 
 0.752
N307_11983
Deoxyhypusine hydroxylase.
   
 
 0.717
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.