STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00801POU domain protein. (617 aa)    
Predicted Functional Partners:
N307_00750
Sal-like 3.
    
 0.563
N307_12472
Sal-like 1.
    
 0.563
N307_08638
Transcription initiation factor IIB.
    
 0.559
N307_08939
Homeobox protein NANOG.
    
 0.552
N307_02622
Brain-specific homeobox protein.
    
 0.552
N307_05120
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
     
 0.547
N307_13277
CREB-binding protein.
    
 0.533
N307_14813
Centromere protein P.
    
 0.531
N307_05503
snRNA-activating protein complex subunit 3.
   
 
  0.518
N307_04257
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L.
    
  0.510
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.