STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07546Retinol dehydrogenase 3. (331 aa)    
Predicted Functional Partners:
N307_00202
Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.870
N307_12606
Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family.
   
 
 0.864
N307_06165
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
   
 0.863
N307_12403
Dehydrogenase/reductase SDR family member 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.863
N307_11693
Retinoid isomerohydrolase.
   
 
 0.862
N307_01420
Short-chain dehydrogenase/reductase 3.
     
 0.860
N307_11706
3-keto-steroid reductase.
     
 0.851
N307_04675
Sterol O-acyltransferase 1; Belongs to the membrane-bound acyltransferase family.
   
 
 0.850
N307_01398
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
   
 
 0.845
N307_06516
Retinal dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
   
 
 0.845
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.