STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13492Zinc finger protein 143. (636 aa)    
Predicted Functional Partners:
N307_01084
Adenylate kinase 9; Belongs to the adenylate kinase family.
    
  0.839
N307_01083
Adenylate kinase 9.
    
  0.839
N307_05541
Histone-lysine N-methyltransferase EZH1.
   
 0.726
N307_01726
Histone-lysine N-methyltransferase EZH2.
   
 0.726
N307_06880
Transcription initiation factor TFIID subunit 9.
    
 0.719
N307_06543
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
     
 0.718
N307_09699
Transcription initiation factor TFIID subunit 11.
    
 0.678
N307_02739
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 0.673
N307_02176
POU domain protein.
    
  0.670
N307_08638
Transcription initiation factor IIB.
   
 0.659
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.