STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08779Pro-interleukin-16. (79 aa)    
Predicted Functional Partners:
N307_08778
PDZ domain-containing protein 7.
 
      0.900
N307_02043
Peripheral plasma membrane protein CASK.
    
 0.733
N307_02111
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
    
 0.703
N307_01679
Intraflagellar transport protein 57.
    
 0.679
N307_04039
Intraflagellar transport protein 172.
    
 0.653
N307_10939
Intraflagellar transport protein 80.
    
 0.645
N307_06463
Intraflagellar transport protein 88.
    
 0.596
N307_08103
Clusterin-associated protein 1.
    
 0.593
N307_00888
Intraflagellar transport protein 81.
    
 0.588
N307_02913
Intraflagellar transport protein 52.
    
 0.580
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.