STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06270CD48 antigen. (190 aa)    
Predicted Functional Partners:
N307_10461
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.729
N307_06651
Hepatocyte growth factor activator.
    
 0.560
N307_08844
Hyaluronan-binding protein 2.
    
 0.560
N307_01680
Leukocyte surface antigen CD47.
    
  0.531
N307_01687
CD166 antigen.
    
  0.531
N307_14375
Uncharacterized protein.
    
  0.531
N307_09310
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 0.524
N307_04073
Hepatocyte growth factor receptor.
    
 0.503
N307_06330
Pikachurin.
    
 0.500
N307_08210
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
    
 0.486
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.