STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06856Rab-like 5. (147 aa)    
Predicted Functional Partners:
N307_00888
Intraflagellar transport protein 81.
    
 0.997
N307_12735
Intraflagellar transport protein 74.
   
 0.995
N307_01679
Intraflagellar transport protein 57.
   
 0.987
N307_12556
Intraflagellar transport protein 46.
    
 0.987
N307_02913
Intraflagellar transport protein 52.
   
 0.987
N307_06463
Intraflagellar transport protein 88.
    
 0.986
N307_10939
Intraflagellar transport protein 80.
   
 0.981
N307_05040
Tetratricopeptide repeat protein 26.
   
 0.976
N307_08103
Clusterin-associated protein 1.
    
 0.974
N307_04039
Intraflagellar transport protein 172.
    
 0.964
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.