STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12545Exonuclease domain-containing protein. (161 aa)    
Predicted Functional Partners:
N307_05942
Putative RNA exonuclease NEF-sp.
  
 0.942
N307_02518
RNA exonuclease 4.
  
 0.848
N307_02737
Apoptosis-enhancing nuclease.
  
 0.779
N307_08427
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
     
 0.649
N307_01443
Exosome component 10.
   
 
 0.636
N307_11032
Exosome complex component RRP41.
   
  
 0.605
N307_12007
Putative ribonuclease.
      
 0.566
N307_05452
Uncharacterized protein.
   
  
 0.546
N307_05120
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
      
 0.519
N307_12201
Uncharacterized protein.
  
 
 0.509
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.