STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08225Proton-coupled amino acid transporter 4. (474 aa)    
Predicted Functional Partners:
N307_10144
Proton-coupled amino acid transporter 1.
  
  
 
0.836
N307_05606
Ras-related GTP-binding protein A.
   
 0.684
N307_00537
Ragulator complex protein LAMTOR2.
    
 0.624
N307_02420
Ragulator complex protein LAMTOR1.
    
 0.598
N307_13033
Regulatory-associated protein of mTOR.
     
 0.582
N307_11988
Ragulator complex protein LAMTOR5.
    
  0.578
N307_06320
Ras-related GTP-binding protein D.
    
 0.555
N307_02079
Ras-related GTP-binding protein C.
    
 0.555
N307_02080
c-Myc-binding protein.
    
 0.545
N307_10849
Paired amphipathic helix protein Sin3a.
    
 0.543
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.