STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04288FERM domain-containing protein 6. (529 aa)    
Predicted Functional Partners:
N307_06824
Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.
    
   0.993
N307_01598
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
    
   0.993
N307_12682
Protein KIBRA.
     
 0.811
N307_09270
Tyrosine-protein phosphatase non-receptor type 13.
 
  
 0.810
N307_13191
Yorkie.
   
 0.786
N307_12053
Merlin.
    
0.729
N307_07342
Merlin.
    
0.729
N307_12643
Serine/threonine-protein kinase 4.
    
 0.727
N307_10312
Serine/threonine-protein kinase 3.
    
 0.727
N307_02111
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
    
 0.727
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.