STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_03989Dual specificity protein phosphatase 6. (334 aa)    
Predicted Functional Partners:
N307_14107
Mitogen-activated protein kinase.
    
 0.961
N307_13420
Mitogen-activated protein kinase.
    
 0.880
N307_09408
Mitogen-activated protein kinase.
    
 0.880
N307_10104
Mitogen-activated protein kinase.
   
 0.826
N307_09407
Mitogen-activated protein kinase.
    
 0.800
N307_13421
Mitogen-activated protein kinase.
    
 0.800
N307_00468
Mitogen-activated protein kinase 10.
   
 0.709
N307_06121
Mitogen-activated protein kinase.
   
 0.709
N307_09540
Mitogen-activated protein kinase 6.
    
 0.690
N307_02192
Mitogen-activated protein kinase 4.
    
 0.690
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.