STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11117Biotinidase. (459 aa)    
Predicted Functional Partners:
N307_03703
Biotin--protein ligase.
    
 0.900
N307_03951
Uncharacterized protein.
    
  0.850
N307_03704
Biotin--protein ligase.
    
 0.845
N307_06551
Pantothenate kinase 4; Belongs to the type II pantothenate kinase family.
     
 0.841
N307_02067
Peroxisomal NADH pyrophosphatase NUDT12.
   
 0.815
N307_08236
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.762
N307_15358
Sorbitol dehydrogenase.
  
 0.719
N307_11031
5-oxoprolinase.
    
 0.692
N307_01516
NAD kinase.
    
 0.684
N307_14474
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
    
  0.682
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.