STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14510Mitogen-activated protein kinase kinase kinase 13. (795 aa)    
Predicted Functional Partners:
N307_01404
Caspase-9; Belongs to the peptidase C14A family.
     
 0.661
N307_07249
E3 ubiquitin-protein ligase SH3RF1.
    
 
 0.518
N307_00439
C-Jun-amino-terminal kinase-interacting protein 2.
    
 
 0.493
N307_11794
MAP3K12-binding inhibitory protein 1.
    
 
 0.447
N307_08268
Centromere protein U.
     
 0.430
N307_10699
Caspase-2; Belongs to the peptidase C14A family.
     
 0.430
N307_12326
Caspase-6; Belongs to the peptidase C14A family.
     
 0.430
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.