STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01437Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)    
Predicted Functional Partners:
N307_01098
DNA polymerase zeta catalytic subunit.
    
 0.999
N307_06924
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.
   
 0.997
N307_00667
DNA polymerase.
    
 0.975
N307_06247
DNA polymerase delta subunit 2.
    
 
 0.969
N307_09471
Protein FAM35A.
    
 
 0.965
N307_11344
DNA polymerase eta.
   
 0.963
N307_01120
Uncharacterized protein.
    
 
 0.955
N307_02010
DNA polymerase kappa.
   
 0.948
N307_15130
Mitotic spindle assembly checkpoint protein MAD2A.
    
0.945
N307_11480
Pachytene checkpoint protein 2; Belongs to the AAA ATPase family.
    
 
 0.925
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.