STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01402Uncharacterized protein; Belongs to the arginase family. (264 aa)    
Predicted Functional Partners:
N307_06020
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.961
N307_02034
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.934
N307_01444
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.933
N307_14673
Ornithine decarboxylase 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.918
N307_07353
Argininosuccinate lyase.
    
 0.915
N307_06766
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.906
N307_00651
Spermine synthase.
  
 
 0.897
N307_12083
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 
 0.895
N307_07947
Cytosolic non-specific dipeptidase.
    
 0.888
N307_05949
Ketimine reductase mu-crystallin.
  
 
 0.887
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.