STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11451Ubiquitin thioesterase ZRANB1. (711 aa)    
Predicted Functional Partners:
N307_00270
Adenomatous polyposis coli protein.
    
  0.950
N307_07331
Polyubiquitin-B.
   
 0.929
N307_02227
Ubiquitin-40S ribosomal protein S27a.
   
  0.927
N307_05702
UBX domain-containing protein 7.
   
   0.863
N307_00856
Polyubiquitin-C.
   
 0.854
N307_15133
TNFAIP3-interacting protein 3.
    
 0.730
N307_04476
Mitogen-activated protein kinase kinase kinase 9.
   
 0.711
N307_14112
Ubiquitin fusion degradation protein 1.
    
 
 0.672
N307_07635
E3 ubiquitin-protein ligase TRAF7.
    
 0.605
N307_07402
TNF receptor-associated factor 4.
    
 0.561
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.