STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07968Glycerol kinase; Belongs to the FGGY kinase family. (526 aa)    
Predicted Functional Partners:
N307_03182
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 0.996
N307_07604
Glycerol-3-phosphate acyltransferase 4.
   
 0.886
N307_01050
26S proteasome non-ATPase regulatory subunit 6.
   
 0.874
N307_01172
Monoglyceride lipase.
    
 0.869
N307_06907
26S proteasome non-ATPase regulatory subunit 3.
   
 0.866
N307_12916
26S proteasome non-ATPase regulatory subunit 12.
   
 0.865
N307_01203
26S proteasome non-ATPase regulatory subunit 4.
   
 0.865
N307_02951
26S proteasome non-ATPase regulatory subunit 11.
   
 0.864
N307_14986
26S proteasome non-ATPase regulatory subunit 13.
   
 0.861
N307_05263
26S proteasome non-ATPase regulatory subunit 2.
   
 0.861
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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