STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_05828Dynein intermediate chain 1, axonemal. (622 aa)    
Predicted Functional Partners:
N307_15468
Dynein heavy chain 8, axonemal.
  
 0.883
N307_13891
Thioredoxin domain-containing protein 3.
    
 
 0.835
N307_00318
Dynein light chain roadblock-type 2.
   
 0.820
N307_02578
Dynein light chain roadblock-type 1.
   
 0.820
N307_10755
Radial spoke head protein 4 A.
   
  
 0.812
N307_02030
Dynein light chain Tctex-type 3.
    
 0.809
N307_13450
Dynein light chain Tctex-type 1.
    
 0.809
N307_05101
Dynein light chain.
    
 0.793
N307_13055
Dynein heavy chain 17, axonemal.
  
 0.788
N307_14570
Dynein beta chain, ciliary.
  
 0.787
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.