STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15440Ly6/PLAUR domain-containing protein 6B. (156 aa)    
Predicted Functional Partners:
N307_01779
Nephrocystin-3.
   
 0.835
N307_07336
TPR_REGION domain-containing protein.
   
 0.835
N307_10460
Kinesin light chain 1.
   
 0.835
N307_14169
Amyloid protein-binding protein 2.
   
 0.835
N307_14760
Ribosomal protein S6 kinase delta-1.
   
 
 0.746
N307_06879
Chromosome-associated kinesin KIF4; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.715
N307_06171
Kinesin-like KIF11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.667
N307_11136
Tropomyosin alpha-1 chain; Belongs to the tropomyosin family.
    
 0.666
N307_08397
Tropomyosin alpha-1 chain; Belongs to the tropomyosin family.
    
 0.666
N307_02208
Tropomyosin beta chain.
    
 0.666
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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