STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00881Huntingtin-interacting protein 1-related protein. (891 aa)    
Predicted Functional Partners:
N307_06654
Huntingtin.
    
 0.969
N307_13748
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.957
N307_00777
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.957
N307_14156
Clathrin heavy chain 1.
    
 0.952
N307_14062
Clathrin heavy chain 1.
    
 0.952
N307_01679
Intraflagellar transport protein 57.
    
 0.898
N307_01023
AP-1 complex subunit beta-1.
     
 0.884
N307_07765
Caspase-10; Belongs to the peptidase C14A family.
    
  0.871
N307_08268
Centromere protein U.
    
  0.859
N307_07145
Epsin-3.
    
 
 0.849
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.