STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13628Alpha-1-antiproteinase F; Belongs to the serpin family. (357 aa)    
Predicted Functional Partners:
N307_01636
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
  
 0.749
N307_07384
Vitronectin.
   
 0.659
N307_08171
Vitamin K-dependent protein C; Belongs to the peptidase S1 family.
  
  0.634
N307_08844
Hyaluronan-binding protein 2.
  
 0.546
N307_14099
Heparin cofactor 2; Belongs to the serpin family.
  
 
 
0.542
N307_03809
Fibrinogen C-terminal domain-containing protein.
   
 0.541
N307_06651
Hepatocyte growth factor activator.
  
 0.532
N307_09078
Retinoic acid receptor responder protein 2.
     
 0.526
N307_07227
Coagulation factor VII; Belongs to the peptidase S1 family.
  
 0.509
N307_07229
Vitamin K-dependent protein Z; Belongs to the peptidase S1 family.
  
 0.509
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (16%) [HD]