STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13624Calmin. (310 aa)    
Predicted Functional Partners:
N307_12507
Dystrophin-related protein 2.
 
 
 
 0.906
N307_13625
Calmin.
 
      0.899
N307_02194
Dystrophin.
 
 
 
 0.888
N307_02193
Dystrophin.
 
 
 
 0.887
N307_07966
Dystrophin.
 
 
 
 0.867
N307_11040
Uncharacterized protein.
 
      0.771
N307_03323
Transcription and mRNA export factor ENY2.
    
 0.709
N307_02961
Transcription initiation protein SPT3.
    
 0.698
N307_07335
Nuclear receptor corepressor 1.
    
 0.666
N307_02992
Intersectin-2.
    
 0.662
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.