STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08249N-acetyltransferase ESCO2. (522 aa)    
Predicted Functional Partners:
N307_08829
Structural maintenance of chromosomes protein 3.
   
 0.981
N307_06689
Sister chromatid cohesion protein PDS5 A.
    
 0.920
N307_10940
Structural maintenance of chromosomes protein 4.
   
 0.907
N307_02366
Sister chromatid cohesion protein PDS5 B.
    
 0.898
N307_02419
Structural maintenance of chromosomes protein 1A.
   
 0.894
N307_13410
Structural maintenance of chromosomes protein 1B.
   
 0.894
N307_14564
Double-strand-break repair protein rad21.
   
 0.891
N307_02840
Double-strand-break repair protein rad21-like 1.
   
 0.891
N307_04018
Structural maintenance of chromosomes protein 6.
   
 0.881
N307_13234
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.823
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.