STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08849Uncharacterized protein C10orf118. (906 aa)    
Predicted Functional Partners:
N307_07897
Vacuolar protein sorting-associated protein 54.
     
 0.623
N307_04682
Centrosome-associated protein 350.
   
    0.604
N307_02255
Protein TSSC1.
      
 0.573
N307_08886
Coiled-coil domain-containing protein 132.
      
 0.572
N307_10959
Rab-like 6.
    
 
 0.561
N307_07424
Carboxypeptidase D.
      
 0.518
N307_15040
RUN domain-containing protein 1.
      
 0.518
N307_10977
Islet cell autoantigen 1.
      
 0.515
N307_12008
Germinal-center associated nuclear protein.
      
 0.476
N307_08848
NHL repeat-containing protein 2.
   
  
 0.454
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.