Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N307_05480 | N307_14730 | A0A093GKV3 | A0A093H6T6 | NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family. | SH3 domain-binding glutamic acid-rich-like 3. | 0.400 |
N307_06797 | N307_14730 | A0A093GNT6 | A0A093H6T6 | TBC domain-containing protein kinase-like. | SH3 domain-binding glutamic acid-rich-like 3. | 0.503 |
N307_08130 | N307_14730 | A0A093GGM3 | A0A093H6T6 | Thioredoxin domain-containing protein 11. | SH3 domain-binding glutamic acid-rich-like 3. | 0.511 |
N307_08717 | N307_14730 | A0A093GWM1 | A0A093H6T6 | Ras-related protein Rab-7b. | SH3 domain-binding glutamic acid-rich-like 3. | 0.601 |
N307_13416 | N307_14730 | A0A093GDG9 | A0A093H6T6 | Selenoprotein O. | SH3 domain-binding glutamic acid-rich-like 3. | 0.601 |
N307_14730 | N307_05480 | A0A093H6T6 | A0A093GKV3 | SH3 domain-binding glutamic acid-rich-like 3. | NEDD8-conjugating enzyme UBE2F; Belongs to the ubiquitin-conjugating enzyme family. | 0.400 |
N307_14730 | N307_06797 | A0A093H6T6 | A0A093GNT6 | SH3 domain-binding glutamic acid-rich-like 3. | TBC domain-containing protein kinase-like. | 0.503 |
N307_14730 | N307_08130 | A0A093H6T6 | A0A093GGM3 | SH3 domain-binding glutamic acid-rich-like 3. | Thioredoxin domain-containing protein 11. | 0.511 |
N307_14730 | N307_08717 | A0A093H6T6 | A0A093GWM1 | SH3 domain-binding glutamic acid-rich-like 3. | Ras-related protein Rab-7b. | 0.601 |
N307_14730 | N307_13416 | A0A093H6T6 | A0A093GDG9 | SH3 domain-binding glutamic acid-rich-like 3. | Selenoprotein O. | 0.601 |