STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08490N-alpha-acetyltransferase 30. (282 aa)    
Predicted Functional Partners:
N307_06358
N-alpha-acetyltransferase 35, NatC auxiliary subunit.
   
 0.997
N307_09733
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.895
N307_02899
Small nuclear ribonucleoprotein-associated protein B.
    
 0.855
N307_04560
Beta-citryl-glutamate synthase B.
     
 0.785
N307_01562
Aspartate aminotransferase.
   
 
 0.754
N307_10983
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.750
N307_08736
Aspartate aminotransferase.
   
 
 0.745
N307_07947
Cytosolic non-specific dipeptidase.
   
 
  0.701
N307_03453
N-alpha-acetyltransferase 50.
   
  
0.629
N307_07008
N-alpha-acetyltransferase 20.
      
 0.574
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.