STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12539Apolipoprotein A-I. (250 aa)    
Predicted Functional Partners:
N307_08126
Uncharacterized protein.
   
 0.979
N307_00506
Uncharacterized protein.
   
 0.977
N307_01872
Retinal-specific ATP-binding cassette transporter.
    
 0.941
N307_05658
Group XV phospholipase A2.
   
 0.915
N307_08617
Vitellogenin-2.
   
 0.867
N307_08616
Vitellogenin-2.
   
 0.867
N307_06828
Vitellogenin-1.
   
 0.867
N307_00858
Scavenger receptor class B member 1; Belongs to the CD36 family.
    
 0.857
N307_02888
Phospholipid transfer protein.
    
 0.838
N307_02424
Lipocln_cytosolic_FA-bd_dom domain-containing protein.
   
 
 0.795
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.