STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06280Myosin-1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (343 aa)    
Predicted Functional Partners:
N307_08599
Unconventional myosin-VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
  
 
 0.901
N307_06278
Myosin-3; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
 
     0.826
N307_04660
Myosin light chain 1, skeletal muscle isoform.
   
 0.797
N307_08858
Myosin light chain 1, cardiac muscle.
   
 0.797
N307_05405
Myosin light chain, embryonic.
   
 0.797
N307_01810
Myosin regulatory light chain 2B, cardiac muscle isoform.
   
 0.763
N307_13202
Myosin regulatory light polypeptide 9.
   
 0.763
N307_13203
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 0.763
N307_00919
Myosin regulatory light chain 2A, cardiac muscle isoform.
   
 0.763
N307_11136
Tropomyosin alpha-1 chain; Belongs to the tropomyosin family.
   
 0.761
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.