STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13853Synaptic vesicular amine transporter. (515 aa)    
Predicted Functional Partners:
N307_04327
Alpha-synuclein; Belongs to the synuclein family.
     
 0.894
N307_11874
Vesicular glutamate transporter 2.
     
 0.861
N307_06696
Vesicular glutamate transporter 3.
     
 0.860
N307_09480
Putative vesicular acetylcholine transporter-A.
  
  
 
0.836
N307_10469
Chromaffin granule amine transporter.
  
  
 
0.834
N307_02911
Vesicular inhibitory amino acid transporter.
     
 0.785
N307_06214
Vesicular inhibitory amino acid transporter.
     
 0.785
N307_02043
Peripheral plasma membrane protein CASK.
     
 0.665
N307_01194
Synaptotagmin-2.
     
 0.664
N307_10658
Synaptobrevin.
   
 
 0.657
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.