STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04029Protein GREB1. (1946 aa)    
Predicted Functional Partners:
N307_08574
Estrogen receptor.
    
 0.849
N307_13277
CREB-binding protein.
    
  0.674
N307_12755
Estrogen receptor beta.
    
 0.626
N307_14813
Centromere protein P.
    
  0.591
N307_07249
E3 ubiquitin-protein ligase SH3RF1.
      
 0.571
N307_13196
Progesterone receptor.
   
 0.555
N307_08276
Ankyrin repeat domain-containing protein 55.
      
 0.422
N307_14974
Rho GTPase-activating protein 30.
      
 0.414
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.