STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_01001Two pore calcium channel protein 1. (813 aa)    
Predicted Functional Partners:
N307_08467
Protein unc-79.
   
 0.995
N307_15024
Two pore calcium channel protein 2.
    
0.873
N307_11298
Voltage-dependent L-type calcium channel subunit beta-2.
   
 0.827
N307_04008
WD repeat-containing protein 35.
    
 0.813
N307_02266
Intraflagellar transport protein 122.
   
 0.807
N307_06680
WD repeat-containing protein 19.
    
 0.793
N307_12914
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
   
 0.765
N307_03092
Sodium channel subunit beta-2.
   
 0.755
N307_14535
Calmodulin; Belongs to the calmodulin family.
    
 0.717
N307_08445
Calmodulin; Belongs to the calmodulin family.
    
 0.717
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.