STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_13988SET and MYND domain-containing protein 5. (395 aa)    
Predicted Functional Partners:
N307_06471
M-phase phosphoprotein 8.
    
 0.775
N307_08678
Transmembrane emp24 domain-containing protein 11.
 
   
 0.770
N307_01951
Chitobiosyldiphosphodolichol beta-mannosyltransferase.
 
 
    0.769
N307_05735
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.749
N307_01617
Tumor protein 63 (p63); Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes.
   
 0.749
N307_06564
Tumor protein p73.
   
 0.749
N307_11917
Histone-lysine N-methyltransferase 2E.
    
 0.747
N307_07256
Polycomb protein EED.
    
 0.746
N307_07619
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.736
N307_08703
Retinoblastoma-binding protein 5.
    
 0.736
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.