STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_00098Protein FAM19A2. (49 aa)    
Predicted Functional Partners:
N307_01170
Kelch repeat and BTB domain-containing protein 12.
      
 0.565
N307_03440
Translin-associated protein X.
      
 0.565
N307_01540
Neurexophilin-2.
  
    0.542
N307_00358
Neurexophilin-1.
  
     0.533
N307_12052
Neurexophilin-1.
  
    0.521
N307_07198
Transmembrane protein FAM155A.
      
 0.514
N307_00401
Mitochondrial inner membrane protease subunit 2.
      
 0.513
N307_00470
UPF0444 transmembrane protein C12orf23.
  
     0.498
N307_02938
BMP/retinoic acid-inducible neural-specific protein 2.
  
    0.492
N307_06711
Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.
  
     0.482
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.