STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14483Tropomodulin-1. (339 aa)    
Predicted Functional Partners:
N307_04660
Myosin light chain 1, skeletal muscle isoform.
   
 
 0.709
N307_04597
Alpha-actinin-2.
   
 
 0.641
N307_13905
Troponin I, fast skeletal muscle.
   
 
 0.619
N307_01979
LIM zinc-binding domain-containing Nebulette.
   
 0.587
N307_01198
Troponin I, slow skeletal muscle.
   
 
 0.583
N307_08845
Nebulin-related-anchoring protein.
   
 0.569
N307_15392
Actin, cytoplasmic type 5.
    
 0.566
N307_07714
Actin, cytoplasmic 1; Belongs to the actin family.
    
 0.566
N307_06139
Actin, aortic smooth muscle.
    
 0.560
N307_13240
Actin, gamma-enteric smooth muscle.
    
 0.560
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.