Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N307_01993 | N307_04149 | A0A093HA56 | A0A093GH66 | Nucleolar GTP-binding protein 1. | Ribosome biogenesis protein WDR12. | 0.996 |
N307_01993 | N307_07317 | A0A093HA56 | A0A093GQZ8 | Nucleolar GTP-binding protein 1. | Notchless protein 1. | 0.993 |
N307_01993 | N307_07827 | A0A093HA56 | A0A093ILB6 | Nucleolar GTP-binding protein 1. | Guanine nucleotide-binding protein-like 3. | 0.998 |
N307_01993 | N307_08359 | A0A093HA56 | A0A093I4F0 | Nucleolar GTP-binding protein 1. | WD repeat-containing protein 18. | 0.963 |
N307_01993 | N307_12067 | A0A093HA56 | A0A093FXU2 | Nucleolar GTP-binding protein 1. | Pescadillo. | 0.998 |
N307_01993 | N307_14593 | A0A093HA56 | A0A093J7T6 | Nucleolar GTP-binding protein 1. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.999 |
N307_01993 | N307_15082 | A0A093HA56 | A0A093GAS7 | Nucleolar GTP-binding protein 1. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.996 |
N307_01993 | N307_15462 | A0A093HA56 | A0A093G2Q3 | Nucleolar GTP-binding protein 1. | Testis-expressed sequence 10 protein. | 0.945 |
N307_03648 | N307_08359 | A0A093GTM2 | A0A093I4F0 | DNA replication factor Cdt1. | WD repeat-containing protein 18. | 0.966 |
N307_04149 | N307_01993 | A0A093GH66 | A0A093HA56 | Ribosome biogenesis protein WDR12. | Nucleolar GTP-binding protein 1. | 0.996 |
N307_04149 | N307_06578 | A0A093GH66 | A0A093G9J2 | Ribosome biogenesis protein WDR12. | Polynucleotide 5'-hydroxyl-kinase NOL9. | 0.790 |
N307_04149 | N307_07317 | A0A093GH66 | A0A093GQZ8 | Ribosome biogenesis protein WDR12. | Notchless protein 1. | 0.918 |
N307_04149 | N307_07827 | A0A093GH66 | A0A093ILB6 | Ribosome biogenesis protein WDR12. | Guanine nucleotide-binding protein-like 3. | 0.997 |
N307_04149 | N307_08359 | A0A093GH66 | A0A093I4F0 | Ribosome biogenesis protein WDR12. | WD repeat-containing protein 18. | 0.976 |
N307_04149 | N307_12067 | A0A093GH66 | A0A093FXU2 | Ribosome biogenesis protein WDR12. | Pescadillo. | 0.999 |
N307_04149 | N307_14593 | A0A093GH66 | A0A093J7T6 | Ribosome biogenesis protein WDR12. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.987 |
N307_04149 | N307_15082 | A0A093GH66 | A0A093GAS7 | Ribosome biogenesis protein WDR12. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.864 |
N307_04149 | N307_15462 | A0A093GH66 | A0A093G2Q3 | Ribosome biogenesis protein WDR12. | Testis-expressed sequence 10 protein. | 0.840 |
N307_06578 | N307_04149 | A0A093G9J2 | A0A093GH66 | Polynucleotide 5'-hydroxyl-kinase NOL9. | Ribosome biogenesis protein WDR12. | 0.790 |
N307_06578 | N307_07827 | A0A093G9J2 | A0A093ILB6 | Polynucleotide 5'-hydroxyl-kinase NOL9. | Guanine nucleotide-binding protein-like 3. | 0.691 |
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