STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_12078Pre-B lymphocyte protein 3. (125 aa)    
Predicted Functional Partners:
N307_06246
Ig heavy chain V-III region VH26.
   
 0.846
N307_10461
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.729
N307_04923
Signal-regulatory protein beta-1 isoform 3.
   
 0.699
N307_02612
Amyloid-like 2.
    
  0.678
N307_00159
T-cell surface glycoprotein CD5.
    
 
 0.676
N307_09260
Tetraspanin.
    
  0.671
N307_04138
Arginase.
    
 
 0.669
N307_02880
Eppin.
    
  0.669
N307_05402
Microtubule-associated protein.
    
   0.658
N307_04667
Microtubule-associated protein.
    
   0.658
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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