STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_04388Villin-1. (820 aa)    
Predicted Functional Partners:
N307_03607
Conserved oligomeric Golgi complex subunit 8.
    
 
 0.765
N307_12825
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.764
N307_03027
Conserved oligomeric Golgi complex subunit 3.
    
 
 0.762
N307_02043
Peripheral plasma membrane protein CASK.
   
  0.691
N307_08268
Centromere protein U.
    
 0.652
N307_11184
Neural Wiskott-Aldrich syndrome protein.
    
 
 0.613
N307_02203
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.606
N307_07765
Caspase-10; Belongs to the peptidase C14A family.
    
 0.573
N307_13333
Adseverin.
  
  
 
0.571
N307_01404
Caspase-9; Belongs to the peptidase C14A family.
    
 0.571
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.