STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07126Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (556 aa)    
Predicted Functional Partners:
N307_12775
Homeobox protein six1b.
   
 
 0.721
N307_12774
Homeobox protein SIX4.
   
 
 0.721
N307_12776
Homeobox protein SIX6.
   
 
 0.636
N307_14084
Anomalous homeobox protein.
   
 
 0.636
N307_14452
Homeobox protein SIX3.
   
 
 0.636
N307_08210
Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family.
   
 
  0.616
N307_07041
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
  
  
 
0.604
N307_06058
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
     
 0.593
N307_09376
Dachshund 1.
    
 
 0.543
N307_00180
Dachshund 2.
    
 
 0.543
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.