STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_11183Hyaluronidase. (429 aa)    
Predicted Functional Partners:
N307_02992
Intersectin-2.
    
 0.896
N307_13870
Alpha-L-iduronidase.
    
 0.865
N307_07351
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
     
 0.857
N307_12706
Intersectin-1.
    
 0.848
N307_04225
Hyaluronidase.
  
  
 
0.836
N307_11864
Arylsulfatase B.
    
  0.832
N307_04289
Kinesin-like KIF25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.795
N307_12961
AP-1 complex subunit gamma.
    
 0.791
N307_07813
Hyaluronidase.
  
  
 
0.788
N307_06087
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 0.778
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.