STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07494Signal peptidase complex subunit 3. (154 aa)    
Predicted Functional Partners:
N307_03282
Signal peptidase complex subunit 2.
   
 0.994
N307_07825
Signal peptidase complex subunit 1.
   
 0.992
N307_02406
Signal peptidase complex catalytic subunit SEC11.
   
 0.984
N307_02116
Signal peptidase I.
   
 0.981
N307_08921
DNA repair protein XRCC4.
   
 0.862
N307_08932
Integrin-alpha FG-GAP repeat-containing protein 2.
   
 0.862
N307_00401
Mitochondrial inner membrane protease subunit 2.
   
 0.862
N307_11893
Mitochondrial inner membrane protease subunit.
   
 0.862
N307_11407
Alpha-1,3/1,6-mannosyltransferase ALG2.
   
 
  0.847
N307_01071
Translocation protein SEC63.
    
 
 0.705
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.