STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_08931Nuclear receptor-interacting protein 2. (222 aa)    
Predicted Functional Partners:
N307_00236
UV excision repair protein RAD23 B.
   
 
 0.771
N307_02227
Ubiquitin-40S ribosomal protein S27a.
   
 
 0.728
N307_07331
Polyubiquitin-B.
   
 
 0.689
N307_14851
2'-5'-oligoadenylate synthase-like 2.
   
 
 0.689
N307_00856
Polyubiquitin-C.
   
 
 0.689
N307_15395
Ubiquitin-like 7.
   
 
 0.638
N307_02326
Ubiquilin-1.
   
 
 0.638
N307_05263
26S proteasome non-ATPase regulatory subunit 2.
    
 
 0.596
N307_04334
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.555
N307_09821
Histone H2A deubiquitinase MYSM1.
   
 
 0.555
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.