STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06937Putative surface protein bspA-like. (141 aa)    
Predicted Functional Partners:
N307_10774
Parafibromin.
    
 0.830
N307_03864
Cyclin-dependent kinase 2-interacting protein.
    
 0.743
N307_13483
RNA polymerase-associated protein CTR9.
    
 0.743
N307_09824
Complement component C8 beta chain.
   
 0.730
N307_15235
RNA polymerase-associated protein RTF1.
    
 0.710
N307_09823
Disabled 1.
   
 0.678
N307_04177
Cytotoxic T-lymphocyte protein 4.
    
   0.658
N307_00139
Baculoviral IAP repeat-containing protein 6.
    
 0.650
N307_01174
Podocalyxin-like 2.
   
  0.631
N307_02612
Amyloid-like 2.
   
  0.631
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.