STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06960Hedgehog-interacting protein. (693 aa)    
Predicted Functional Partners:
N307_09121
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.970
N307_04372
Indian hedgehog protein.
    
 0.960
N307_14385
Sortilin-related receptor.
    
 0.848
N307_06535
Amyloid beta A4 protein-binding family A member 2.
   
 
 0.680
N307_04315
Amyloid beta A4 protein-binding family A member 1.
   
 
 0.680
N307_11198
Protein patched 1.
    
 
 0.645
N307_00583
M16C_associated domain-containing protein.
    
   0.633
N307_10662
Glyceraldehyde-3-phosphate dehydrogenase.
     
 0.592
N307_01142
DCC-interacting protein 13-alpha.
    
 
 0.591
N307_06651
Hepatocyte growth factor activator.
    
 0.591
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.