STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_14566Eukaryotic translation initiation factor 3 subunit H. (308 aa)    
Predicted Functional Partners:
N307_07738
Eukaryotic translation initiation factor 3 subunit B.
   
 0.999
N307_06074
Eukaryotic translation initiation factor 3 subunit F; Belongs to the eIF-3 subunit F family.
   
 0.999
EIF3E
Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.999
N307_05154
Eukaryotic translation initiation factor 3 subunit D; Belongs to the eIF-3 subunit D family.
   
 0.999
N307_05123
Eukaryotic translation initiation factor 3 subunit L.
   
 0.999
N307_14652
Eukaryotic translation initiation factor 3 subunit I.
   
 0.999
N307_13860
Eukaryotic translation initiation factor 3 subunit A.
   
 0.999
N307_00388
Eukaryotic translation initiation factor 3 subunit J.
    
 0.997
N307_05325
40S ribosomal protein S6.
   
 0.988
N307_05122
MICAL-like 1.
   
 0.982
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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