STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_15002Catenin delta-1. (866 aa)    
Predicted Functional Partners:
N307_01802
Catenin beta-1.
    
 0.900
N307_00100
Rho-related GTP-binding protein RhoC.
    
 0.890
N307_09250
Receptor-type tyrosine-protein phosphatase eta.
    
 0.885
N307_00770
Cell division control protein 42.
    
 0.870
N307_04073
Hepatocyte growth factor receptor.
   
 0.869
N307_11127
Tyrosine-protein kinase.
    
 0.868
N307_01100
Tyrosine-protein kinase.
    
 0.866
N307_05139
Ras-related C3 botulinum toxin substrate 2.
    
 0.864
N307_10685
Tyrosine-protein phosphatase non-receptor type 6.
    
  0.859
N307_14903
Receptor-type tyrosine-protein phosphatase mu.
    
  0.854
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.