STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_06321Ubiquitin-conjugating enzyme E2 J1. (309 aa)    
Predicted Functional Partners:
N307_09894
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.998
N307_05713
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.926
N307_04120
Fanconi anemia group M protein.
    
 0.894
N307_01492
Ubiquitin-conjugating enzyme E2 J2.
    
0.883
N307_00139
Baculoviral IAP repeat-containing protein 6.
   
 0.881
N307_02293
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.866
N307_08153
E3 ubiquitin-protein ligase TRIP12.
    
 0.865
N307_11104
Protein sel-1 1.
    
 
 0.848
N307_12235
Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.
     
0.840
N307_09283
Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.835
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.