STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_09080SCO-spondin. (75 aa)    
Predicted Functional Partners:
N307_11830
FRAS1-related extracellular matrix protein 1.
    
 0.834
N307_15097
Extracellular matrix protein FRAS1.
    
 0.820
N307_02444
Nucleoporin GLE1.
    
 0.742
N307_14117
Platelet glycoprotein Ib beta chain.
   
 0.700
N307_08259
Platelet glycoprotein IX.
   
 0.699
N307_00289
Leucine-rich repeat-containing protein 15.
    
 0.677
N307_06621
Coagulation factor V.
    
 0.665
N307_12513
Coagulation factor VIII; Belongs to the multicopper oxidase family.
    
 0.665
N307_04337
Integrin beta; Belongs to the integrin beta chain family.
    
 0.656
N307_13149
Integrin beta.
    
 0.656
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.