STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N307_07228Coagulation factor X; Belongs to the peptidase S1 family. (213 aa)    
Predicted Functional Partners:
N307_05804
Tissue factor.
    
 0.848
N307_04073
Hepatocyte growth factor receptor.
    
 0.846
N307_01636
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
  
0.814
N307_06621
Coagulation factor V.
   
 0.773
N307_10461
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.735
N307_12513
Coagulation factor VIII; Belongs to the multicopper oxidase family.
   
 0.693
N307_15243
WD repeat-containing protein 90.
    
 0.682
N307_01447
Mannan-binding lectin serine protease 2.
 
 
  
 0.652
N307_06246
Ig heavy chain V-III region VH26.
    
  0.642
N307_08171
Vitamin K-dependent protein C; Belongs to the peptidase S1 family.
  
 
0.629
Your Current Organism:
Picoides pubescens
NCBI taxonomy Id: 118200
Other names: Dendrocopos pubescens, Downy woodpecker, Dryobates pubescens, P. pubescens
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